异养微生物固定CO2的合成生物学研究进展

人类活动造成大气二氧化碳（CO₂）浓度不断升高,使当今世界面临着气候变化的重大危机。微生物CO₂固定为实现地球“碳中和”提供了一条有前景的绿色发展路线。与自养微生物相比,异养微生物具有更快的生长速度和更先进的遗传工具,但是其固定CO₂的能力还很有限。近年来,基于合成生物学技术强化异养微生物CO₂固定受到诸多关注,主要包括优化能量供给、改造羧化途径以及基于异养微生物间接固定CO₂。本综述将围绕上述3个方面重点讨论异养微生物CO₂固定的研究进展,为将来更好地利用微生物CO₂固定技术实现“碳达峰、碳中和”提供参考。     

典型功能层带-填埋场覆盖层中四氯化碳代谢机制及功能微生态响应

垃圾填埋场是四氯化碳(carbon tetrachloride, CT)污染的重要来源,明晰覆盖层功能层带中CT的转化机制对其污染控制尤为重要。本研究通过构建模拟覆盖层系统,开展了CT沿程生物降解及微生态研究。覆盖层理化特性分析表明,长期生物氧化使覆盖层形成了稳定存在的厌氧层(>45 cm)、缺氧层(15–45 cm)和好氧层(0–15 cm)功能层带,各特征层带氧化还原电位、微生物群落结构差异显著,为CT降解提供了生物资源和有利条件。降解结果显示,CT在厌氧层和缺氧层脱氯产生氯仿(chloroform,CF)和二氯甲烷(dichloromethane,DCM)及氯离子(Cl–),副产物在30 cm处浓度最大,好氧层中CF和DCM迅速发生好氧降解;CT降解速率为13.2–103.6μg/(m2·d),随填埋气通量增大而增大。多样性测序结果表明,不同层带功能菌属差异显著,中慢生根瘤菌(Mesorhizobium)为好氧层CT潜在降解菌属,硫杆菌(Thiobacillus)和间孢囊菌(Intrasporangium)为厌氧层和缺氧层潜在功能菌属;覆盖土中6种脱氯菌属和18种甲烷氧化菌...     

微生物固碳的电子供给策略研究进展北大核心CSCD

随着生物化工技术的不断发展成熟,通过改造微生物已可以实现二氧化碳、甲烷等温室气体的固定、转化和利用,而电子传递及能量供给对微生物固碳效率起着决定性的作用。本文首先分析了好氧性嗜甲烷菌、化能自养微生物等天然微生物细胞内外的直接、间接电子传递系统。在此基础上,围绕微生物固碳细胞工厂的构建,进一步介绍了基于光能、电能的人工电子供给策略及其对固碳过程中代谢通量、合成路径和供能效率的影响。最后针对微生物固碳的关键共性技术难点,简要展望了可行性的解决方案及相关应用前景。     

Carbon partitioning in Arabidopsis thaliana is a dynamic process controlled by the plants metabolic status and its circadian clock

Plant growth involves the coordinated distribution of carbon resources both towards structural components and towards storage compounds that assure a steady carbon supply over the complete diurnal cycle. We used ¹⁴CO₂ labelling to track assimilated carbon in both source and sink tissues. Source tissues exhibit large variations in carbon allocation throughout the light period. The most prominent change was detected in partitioning towards starch, being low in the morning and more than double later in the day. Export into sink tissues showed reciprocal changes. Fewer and smaller changes in carbon allocation occurred in sink tissues where, in most respects, carbon was partitioned similarly, whether the sink leaf assimilated it through photosynthesis or imported it from source leaves. Mutants deficient in the production or remobilization of leaf starch exhibited major alterations in carbon allocation. Low‐starch mutants that suffer from carbon starvation at night allocated much more carbon into neutral sugars and had higher rates of export than the wild type, partly because of the reduced allocation into starch, but also because of reduced allocation into structural components. Moreover, mutants deficient in the plant's circadian system showed considerable changes in their carbon partitioning pattern suggesting control by the circadian clock.     

Phosphorus recycling in photorespiration maintains high photosynthetic capacity in woody species

Leaf photosynthetic CO₂ responses can provide insight into how major nutrients, such as phosphorus (P), constrain leaf CO₂ assimilation rates (A_net). However, triose‐phosphate limitations are rarely employed in the classic photosynthesis model and it is uncertain as to what extent these limitations occur in field situations. In contrast to predictions from biochemical theory of photosynthesis, we found consistent evidence in the field of lower A_net in high [CO₂] and low [O₂] than at ambient [O₂]. For 10 species of trees and shrubs across a range of soil P availability in Australia, none of them showed a positive response of A_net at saturating [CO₂] (i.e. A_max) to 2 kPa O₂. Three species showed >20% reductions in A_max in low [O₂], a phenomenon potentially explained by orthophosphate (P_i) savings during photorespiration. These species, with largest photosynthetic capacity and P_i > 2 mmol P m^?2, rely the most on additional P_i made available from photorespiration rather than species growing in P‐impoverished soils. The results suggest that rarely used adjustments to a biochemical photosynthesis model are useful for predicting A_max and give insight into the biochemical limitations of photosynthesis rates at a range of leaf P concentrations. Phosphate limitations to photosynthetic capacity are likely more common in the field than previously considered.     

Stem CO2 efflux in six co‐occurring tree species: underlying factors and ecological implications

Stem respiration plays a role in species coexistence and forest dynamics. Here we examined the intra‐ and inter‐specific variability of stem CO₂ efflux (E) in dominant and suppressed trees of six deciduous species in a mixed forest stand: Fagus sylvatica L., Quercus petraea [Matt.] Liebl, Quercus pyrenaica Willd., Prunus avium L., Sorbus aucuparia L. and Crataegus monogyna Jacq. We conducted measurements in late autumn. Within species, dominants had higher E per unit stem surface area (E_s) mainly because sapwood depth was higher than in suppressed trees. Across species, however, differences in E_s corresponded with differences in the proportion of living parenchyma in sapwood and concentration of non‐structural carbohydrates (NSC). Across species, E_s was strongly and NSC marginally positively related with an index of drought tolerance, suggesting that slow growth of drought‐tolerant trees is related to higher NSC concentration and E_s. We conclude that, during the leafless period, E is indicative of maintenance respiration and is related with some ecological characteristics of the species, such as drought resistance; that sapwood depth is the main factor explaining variability in E_s within species; and that the proportion of NSC in the sapwood is the main factor behind variability in E_s among species.     

Laccaria bicolor aquaporin LbAQP1 is required for Hartig net development in trembling aspen (Populus tremuloides)

The development of ectomycorrhizal associations is crucial for growth of many forest trees. However, the signals that are exchanged between the fungus and the host plant during the colonization process are still poorly understood. In this study, we have identified the relationship between expression patterns of Laccaria bicolor aquaporin LbAQP1 and the development of ectomycorrhizal structures in trembling aspen (Populus tremuloides) seedlings. The peak expression of LbAQP1 was 700‐fold higher in the hyphae within the root than in the free‐living mycelium after 24 h of direct interaction with the roots. Moreover, in LbAQP1 knock‐down strains, a non‐mycorrhizal phenotype was developed without the Hartig net and the expression of the mycorrhizal effector protein MiSSP7 quickly declined after an initial peak on day 5 of interaction of the fungal hyphae with the roots. The increase in the expression of LbAQP1 required a direct contact of the fungus with the root and it modulated the expression of MiSSP7. We have also determined that LbAQP1 facilitated NO, H₂O₂ and CO₂ transport when heterologously expressed in yeast. The report demonstrates that the L. bicolor aquaporin LbAQP1 acts as a molecular signalling channel, which is fundamental for the development of Hartig net in root tips of P. tremuloides.     

川东地区白背飞虱迁入种群虫源地分布与降落机制

【目的】本研究旨在确定四川达州白背飞虱Sogatella furcifera(Horváth)迁入虫源地及其降落机制,以期为川东地区白背飞虱预警和有效防控提供依据。【方法】运用大气质点轨迹分析平台HYSPLIT4.8对1991-2013年达州灯下白背飞虱主要迁入高峰日进行轨迹模拟,并运用气象图形处理软件Grads对主要迁入高峰日进行气象背景分析。【结果】达州白背飞虱主要在6-7月迁入,7月份是迁入高峰期。6月虫源主要来自广西西北、中部地区;7月虫源主要来自贵州中西部、北部,广西西北部和云南东北部也可提供部分虫源。【结论】四川达州白背飞虱迁入虫源主要来自贵州大部,部分来自云南东北部和广西西北部。由于气候条件和地形胁迫引起的降水、垂直气流和风向切变是白背飞虱大规模集中降落的主要原因。     

Ab initio DFT study of structural and mechanical properties of methane and carbon dioxide hydrates

The structural and mechanical properties of methane and carbon dioxide hydrates were investigated using density functional theory simulations. Well-established equations of state of solids and exchange-correlation functionals were used for fitting the unit lattice total energy as a function of volume, and the full second-order elastic constants of these two gas hydrates were determined by energy–strain analyses. The polycrystalline elastic properties were also calculated from the unit lattice results. The final results for methane hydrate agree well with available experimental data and with other theoretical results. The two gas hydrates were found to be highly elastically isotropic, but they differed significantly in shear properties. The presented results for carbon dioxide hydrates are the first complete set reported so far. The results are a significant contribution to the ab initio material characterisation of gas hydrates required for ongoing fundamental studies and technological applications.